#!/bin/bash

#------------------------------------------------------------------------------
#          Harvard University Atmospheric Chemistry Modeling Group            !
#------------------------------------------------------------------------------
#BOP
#
# !MODULE: copy_1mon
#
# !DESCRIPTION: Copies the 1-month benchmark run directories to GcGrid for
#  permanent storage. This will sync with the AS ftp site approximately every
#  hour so that the GEOS-Chem Steering Committee and developers can examine
#  outputs from the 1-month benchmark simulations in a browser.
#\\
#\\
# !CALLING SEQUENCE:
#  ./copy_1month VERSION
#
# !REVISION HISTORY: 
#  See the GEOS-Chem UnitTest git history
#EOP
#------------------------------------------------------------------------------
#BOC

# Make sure the version string is passed
if [ $# != 1 ]; then 
   echo "Usage: copy_1mon VERSION"
   exit 0
fi

#----------------------------------------------------------------------------
# Copy output to gcgrid for permanent storage
#----------------------------------------------------------------------------

# Set variables
version=$1
dir="/n/holylfs/EXTERNAL_REPOS/GEOS-CHEM/gcgrid/geos-chem/1mo_benchmarks/GC_12/$version/GCC/"

echo "======================================================================="
echo "Copying 1-month benchmark output to $dir"
echo "======================================================================="
echo " "

# Copy entire contents of 1-month benchmark run directory
cp -av ../../GC_$version/* $dir

# Remove files and directories not needed for permanent storage
rm -v $dir/geos.mp
rm -v $dir/validate.pl
rm -rf $dir/CodeDir

# Change group name of new directories and files
chgrp jacob_gcst $dir
chgrp jacob_gcst $dir/*
chgrp jacob_gcst $dir/OutputDir/*
chgrp jacob_gcst $dir/Plots/*
chgrp jacob_gcst $dir/Plots/*/*

# Change permissions of new directory and files
chmod 775 $dir
chmod 664 $dir/*
chmod 775 $dir/OutputDir
chmod 664 $dir/OutputDir/*
chmod 775 $dir/Plots
chmod 775 $dir/Plots/*
chmod 664 $dir/Plots/*/*
chmod 664 $dir/Plots/*pdf
chmod 664 $dir/Plots/*txt
chmod 664 $dir/Plots/*json
chmod 664 $dir/Plots/input.1mon
chmod 664 $dir/Plots/*results*
chmod 775 $dir/getRunInfo
chmod 775 $dir/Makefile
chmod 775 $dir/$version.run

# Print reminders to screen
echo " "
echo "======================================================================="
echo "Done copying 1-month benchmark output to $dirn"
echo " "
echo "*** REMINDERS ***"
echo " - Update README file to reflect current version"
echo " - Copy results files from UT to output directory"
echo "======================================================================="

# Clear variables
unset version
unset dir

# Exit normally
exit 0
#EOC