#!/bin/bash
#------------------------------------------------------------------------------
#          Harvard University Atmospheric Chemistry Modeling Group            !
#------------------------------------------------------------------------------
#BOP
#
# !MODULE: copy_1yr_rnpbbe
#
# !DESCRIPTION: Copy the 1-year Rn-Pb-Be benchmark run directory so that it can
#  be copied to the permanent storage site on gcgrid.
#\\
#\\
# !CALLING SEQUENCE:
#  ./copy_1yr_rnpbbe VERSION RUN#
#
#
# !EXAMPLE:
#  ./copy_1yr_rnpbbe v11-02e RnPbBePasv-Run0
#
# !REMARKS:
#
# !REVISION HISTORY: 
#  25 Jan 2018 - M. Sulprizio- Initial version
#EOP
#------------------------------------------------------------------------------
#BOC

# Make sure the version string is passed
if [ $# != 2 ]; then 
   echo "Usage: copy_1mon VERSION Run#"
   exit 0
fi

# Set variables
version=$1
run=$2
dir="/n/holylfs/EXTERNAL_REPOS/GEOS-CHEM/gcgrid/geos-chem/1yr_benchmarks/v11-02/$version/"

# Make the directory if it does not exist
if [ ! -d $dir ]; then
  echo "Creating $dir"
  mkdir $dir
  chgrp jacob_gcst $dir
  chmod 775 $dir
fi

echo "======================================================================="
echo "Copying 1-year Rn-Pb-Be-Pasv benchmark run directory to $dir"
echo "======================================================================="
echo " "

# Copy entire contents of 1-month benchmark run directory
cp -avL ../../$run $dir

# Change group name of new directories and files
chgrp jacob_gcst $dir$run
chgrp jacob_gcst $dir$run/*
chgrp jacob_gcst $dir$run/*/*
chgrp jacob_gcst $dir$run/*/output/*

# Change permissions of new directories and files
chmod 775 $dir$run
chmod 775 $dir$run/*
chmod 664 $dir$run/*/*
chmod 775 $dir$run/*/output
chmod 664 $dir$run/*/output/*
chmod 775 $dir$run/*/*_1yr_rnpbbe

echo " "
echo "==========================================================="
echo "Done copying Rn-Pb-Be-Pasv 1-year benchmark run directory"
echo " "
echo "*** REMINDER ***"
echo " - Update README file to reflect version updates"
echo "==========================================================="

# Exit normally
exit 0
#EOC